sbmlteam libsbml issues

sbmlteam / libsbml

LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (SBML). It offers language bindings for C, C++, C#, Java, JavaScript, MATLAB, Perl, PHP, Python, R and Ruby.

https://sbml.org/software/libsbml

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issues

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ERROR when installing libsbml for R version

#409 complicatedZ opened 3 days ago
2
Make libSBML well consumable via FetchContent

#408 starboerg opened 1 month ago
0
Fixing nightlies

#407 fbergmann closed 1 month ago
0
fix nightly build

#406 fbergmann closed 1 month ago
0
Add basic converter for inferring reactions

#405 fbergmann closed 1 month ago
0
Update GitHub Actions where needed

#404 fbergmann closed 1 month ago
0
sort test failures

#403 fbergmann closed 1 month ago
0
issues with ODE -> Reaction converter

#402 fbergmann opened 1 month ago
0
Pull fixes.

#401 luciansmith closed 2 months ago
0
At attempt to fix #398

#400 luciansmith opened 2 months ago
0
Fix behavior of render getAllElements and memory leaks from there and elsewhere.

#399 luciansmith opened 2 months ago
0
Uninitialized jump in render's Transformation2D::readAttributes

#398 luciansmith opened 2 months ago
1
SBO Tests yield wrong result (at least in JSON)

#397 Schmoho closed 2 months ago
1
Add object sid in error messages

#396 matthiaskoenig opened 2 months ago
2
libsbml claims biomodel 1065 is invalid. I don't think it is?

#395 luciansmith closed 2 months ago
2
RateRuleConverter crashes on unsupported math

#394 fbergmann closed 2 months ago
0
Issue 385: flexibility with running strict unit validation

#393 fbergmann closed 2 months ago
1
Sk/small fixes

#392 skeating opened 2 months ago
1
#390: add hasPrefix to xmlnode / xmlattributes

#391 fbergmann closed 2 months ago
0
XMLNode_getPrefix unexpectedly returns NULL when prefix is absent

#390 eltix closed 2 months ago
3
move checks for library symbol to find module

#389 luciansmith closed 3 months ago
0
Remove the check for zlib.h.

#388 luciansmith closed 3 months ago
0
#386: fix compilation of java when using gnumake

#387 fbergmann closed 2 months ago
0
JavaBindings dont build with gnumake && python 3.12

#386 Schmoho closed 3 months ago
4
checkConsistencyWithStrictUnits reports Units issues as Errors not Warnings

#385 matthiaskoenig closed 2 months ago
8
Sk/distrib units

#384 skeating closed 3 months ago
0
update dependency checks

#383 fbergmann opened 3 months ago
0
Detect ZLIB using find module

#382 fbergmann closed 3 months ago
0
Prepare 5.20.4 release

#381 fbergmann closed 3 months ago
0
Remove all checks for SBML core version when adding package elements.

#380 luciansmith closed 3 months ago
0
check error messages for `This functionality will be improved in later versions of libSBML.`

#379 fbergmann opened 4 months ago
1
Unit validation not working on AssignmentRule

#378 matthiaskoenig closed 3 months ago
3
Assignment cycle optimization

#377 fbergmann closed 3 months ago
1
XMLNode should have an overload that addopts a child

#376 fbergmann opened 5 months ago
0
add printf style formatting to Rf_error calls

#375 spotaws closed 5 months ago
0
Improve the efficiency of the AssignmentCycles::determineAllDependencies() function

#374 eltix closed 3 months ago
6
Change model failures to slightly more likely mistake.

#373 luciansmith closed 3 months ago
0
Disable csharp build on nightly macOS runs

#371 fbergmann closed 6 months ago
0
Replace deprecated unittest.makeSuite()

#370 penguinpee closed 7 months ago
1
Update README.md

#369 skeating closed 7 months ago
0
- ensure expat can be found when crosscompiling

#368 fbergmann closed 7 months ago
1
File 99107-fail-01-06-10102 not actually wrong

#367 luciansmith opened 8 months ago
1
Typo in the tag name

#372 SolunarNexus closed 3 months ago
1
Enable CMake user option `BUILD_SHARED_LIB`

#366 Waschina closed 3 months ago
0
Unit validation with distrib uniform not working

#365 matthiaskoenig closed 3 months ago
6
Can't install SBML in MATLAB 2023b

#364 Elisshaze opened 10 months ago
1
Add piecewise-to-events translators

#363 luciansmith opened 10 months ago
1
Allow FBC objects to be used in both L3v1 and L3v2 core documents.

#362 luciansmith closed 3 months ago
0
FBC: Can't make package version 3 object in L3v2 core model.

#360 luciansmith closed 3 months ago
4
Update SBO

#359 luciansmith opened 10 months ago
0