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libsbml
LibSBML is a native library for reading, writing and manipulating files and data streams containing the Systems Biology Markup Language (SBML). It offers language bindings for C, C++, C#, Java, JavaScript, MATLAB, Perl, PHP, Python, R and Ruby.
https://sbml.org/software/libsbml
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- add compile option for mxArrayToString
#301
fbergmann
closed
1 year ago
0
Add test case for replaceFD issue #299
#300
lkeegan
closed
1 year ago
1
bug in `SBMLTransforms::replaceFD`?
#299
lkeegan
closed
1 year ago
2
Cmake documentation
#298
fbergmann
closed
1 year ago
1
'Latest' version isn't latest.
#297
luciansmith
closed
1 year ago
5
Possible issue with the .setAnnotation method (Python)?
#296
woosubs
closed
1 year ago
8
C modelhistory
#295
skeating
closed
1 year ago
0
Update the spec URLs.
#294
luciansmith
closed
1 year ago
0
Python 3.11 support?
#293
tillea
closed
1 year ago
2
fix Java Testrunner
#292
fbergmann
closed
1 year ago
0
Accept timezones really far from UTC
#291
avandecreme
closed
1 year ago
0
Can't add ModelHistory without dates even in L3V2
#290
avandecreme
closed
1 year ago
4
Time zones with offsets below -11:59 and above 11:59 are not accepted by the Date class
#289
avandecreme
closed
1 year ago
1
Incorrect warning
#288
skeating
closed
1 year ago
1
libsbml on Windows 11 with Visual Studio Code 17 2022
#287
lmriccardo
closed
1 year ago
2
Function calls with more than 2 parameters prevent unit inference
#286
avandecreme
opened
1 year ago
0
- ubuntu 18.04 no longer supported
#285
fbergmann
closed
1 year ago
0
Fix crash when infering units
#284
avandecreme
closed
1 year ago
3
Idea: Add more biological qualifiers
#283
GwennyGit
closed
1 year ago
2
Missing inclusion of a header in StructureFields.cpp, version 5.19.7
#282
pgrt
closed
1 year ago
1
Wrong Java imports in AutoTestRunner, version 5.19.7
#281
pgrt
closed
1 year ago
0
Does bqmodel have 'hasProperty' or only bqbiol?
#280
luciansmith
closed
1 year ago
4
install libsbml on mac os using Matlab interface
#279
krithikakrishnan04
closed
1 year ago
5
find_package does not work on Ubuntu 22.10
#278
kaiserls
opened
1 year ago
2
Fbc v3 matlab
#277
skeating
closed
1 year ago
1
#275: check that spatial dimensions match before running test
#276
fbergmann
closed
1 year ago
4
spatial validation rule 1221350 is to stringent
#275
fbergmann
closed
1 year ago
1
libSBML SBMLode causes sym>convertChar error
#274
thomassligon
closed
1 year ago
4
Update autotools config for better platform detection
#273
tom91136
closed
2 years ago
2
use . to access convertStringToXMLNode
#272
fbergmann
closed
2 years ago
0
libsbml test failed with upcoming SWIG 4.1.0
#271
jplesnik
closed
2 years ago
0
- bump to 5.19.7
#270
fbergmann
closed
2 years ago
0
#268 provide detailed error message on failure
#269
fbergmann
closed
2 years ago
0
Matlab OutputSBML fails with nondescript error
#268
tpfau
closed
1 year ago
1
As Mattias noticed, diffusion and advection can apply to parameters.
#267
luciansmith
closed
2 years ago
0
Infer reactions
#266
skeating
closed
2 years ago
1
Relax annot
#265
skeating
closed
2 years ago
0
Fbc v3 fixes
#264
skeating
closed
2 years ago
0
Remove the three 'Robin' boundary conditions.
#263
luciansmith
closed
2 years ago
0
Fix fbc v3 issues
#262
skeating
closed
2 years ago
2
Rate rule to Reaction converter
#261
skeating
opened
2 years ago
0
written RDF tags in creator are different from tags stated in SBML specification
#260
matthiaskoenig
closed
2 years ago
2
`createdDate` and `modifiedDate` should be optional attributes on `ModelHistory`
#259
matthiaskoenig
closed
2 years ago
3
spatial: put 'difference' back.
#258
luciansmith
closed
2 years ago
0
fbc-v3: UserDefinedConstraintComponents not written in SBML L3V2
#257
matthiaskoenig
closed
2 years ago
0
fbc-v3: xmlns="http://sbml.org/fbc/keyvaluepair" in <listOfKeyValuePairs> element is an invalid namespace.
#256
matthiaskoenig
closed
2 years ago
0
fbc: GeneProductAssociations not written to SBML
#255
matthiaskoenig
closed
2 years ago
0
Python kernel dies when overwriting SBMLDocument and accessing model
#254
matthiaskoenig
closed
2 years ago
2
fbc: `setAssociation` should return error code if association is not set
#253
matthiaskoenig
closed
2 years ago
1
FbcModelPlugin C API for createObjective and createGeneProduct
#252
exaexa
closed
2 years ago
0
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