sborstein / AnnotationBustR

AnnotationBustR
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“type not fully Ann.” error #26

Open valkm2 opened 11 months ago

valkm2 commented 11 months ago

Which information should be provided in order to prevent this error from happening. I have tried to download sequences from Genbank accessions such as CP009685.1 and U00096.3. However for each identifier that I provide to Annotationbust, I am only able to get this error message. How can this be fixed?

sborstein commented 9 months ago

This typically Indicates that the sequence is on GenBank, but is lacking necessary annotation information to fully extract all subsequences. They may be concatenated and not contain position information for each subsequence or that they are not stored as subsequences accessible in ACNUC which is queried by the seqinr dependency. Given it isn't clear to me what exactly you were trying to extract or how you were trying to extract it, I can't really provide any more insight.