I encounter an error while running AMICA models on multiple nodes of the NSG server.
The output file and the script are as follows. The script works well on single node.
Looking forward to you reply. Thanks!
Rowsline
The output file STDOUT:
EEGLAB: adding "bids-matlab-tools" v5.3.1 (see >> help eegplugin_bids)EEGLAB: adding "bva-io" v1.7 (see >> help eegplugin_bva_io)
EEGLAB: adding "clean_rawdata" v2.5 (see >> help eegplugin_clean_rawdata)
EEGLAB: adding "corrmap" v2.1 (see >> help eegplugin_corrmap)
EEGLAB: adding "dipfit" v4.3 (see >> help eegplugin_dipfit)
EEGLAB: adding "erpssimport" v1.01 (see >> help eegplugin_erpssimport)
EEGLAB: adding "firfilt" v2.4 (see >> help eegplugin_firfilt)
EEGLAB: adding "neuroscanio" v1.4 (see >> help eegplugin_neuroscanio)You are using the latest version of EEGLAB.
Using Unix executable for Expanse supercomputer, you may need to recompile if you encounter librairy errors
Writing data file: /expanse/projects/nsg/home/nsguser/ngbw.expanse.nsgprod/workspace/NGBW-JOB-EEGLAB_EXPANSE-853217D17DB4472C875040EB1325CDCA/testAMICA/tmpdata81472.fdt
ans = 0
/bin/bash: qconf: command not found
ssh: relocation error: ssh: symbol EVP_KDF_ctrl version OPENSSL_1_1_1b not defined in file libcrypto.so.1.1 with link time reference
No gm present, setting num_models to 1
No W present, exiting
The script I used:
%% test_script_amica.m
% add eeglab to path
eeglab; close;
Hi there,
I encounter an error while running AMICA models on multiple nodes of the NSG server.
The output file and the script are as follows. The script works well on single node.
Looking forward to you reply. Thanks!
Rowsline
The output file STDOUT:
EEGLAB: adding "bids-matlab-tools" v5.3.1 (see >> help eegplugin_bids)EEGLAB: adding "bva-io" v1.7 (see >> help eegplugin_bva_io) EEGLAB: adding "clean_rawdata" v2.5 (see >> help eegplugin_clean_rawdata) EEGLAB: adding "corrmap" v2.1 (see >> help eegplugin_corrmap) EEGLAB: adding "dipfit" v4.3 (see >> help eegplugin_dipfit) EEGLAB: adding "erpssimport" v1.01 (see >> help eegplugin_erpssimport) EEGLAB: adding "firfilt" v2.4 (see >> help eegplugin_firfilt) EEGLAB: adding "neuroscanio" v1.4 (see >> help eegplugin_neuroscanio)You are using the latest version of EEGLAB.
ans = 0
/bin/bash: qconf: command not found ssh: relocation error: ssh: symbol EVP_KDF_ctrl version OPENSSL_1_1_1b not defined in file libcrypto.so.1.1 with link time reference No gm present, setting num_models to 1 No W present, exiting
The script I used:
%% test_script_amica.m % add eeglab to path eeglab; close;
% load dataset filepath = [ pwd filesep ]; filename = 'data0.set'; EEG = pop_loadset(filename,filepath);
% define parameters numprocs = 3; % # of nodes (1-4: default 1) max_threads = 24; % # of threads (1-24: default = 24) num_models = 5; % # of models of mixture ICA max_iter = 2000; % max number of learning steps
% run amica on NSG outdir = [ pwd filesep 'EEGAMICA' filesep ]; runamica15(EEG.data, 'num_models',num_models, 'outdir',outdir, ... 'numprocs', numprocs, 'max_threads', max_threads, 'max_iter',max_iter);