schneebergerlab / AMPRIL-genomes

scripts for the project of seven thaliana genomes assembly
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pangenome file prepare #6

Open lin-jiahao opened 4 years ago

lin-jiahao commented 4 years ago

Hello, This is a very great work that make me learned a lot. Thank you very much for sharing. Here I have a question on pangenome, that is how to prepare the bed formated file "xx.del.bed" and "xx.ins.bed", because it is not very clear in the tutorial, is this file available in the sv.txt file generated by Syri? Hope to get your reply and help, thank you very much!