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schneebergerlab / syri

Synteny and Rearrangement Identifier
https://schneebergerlab.github.io/syri/
MIT License
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SyRI module error #119

Closed ssamberkar closed 2 years ago

ssamberkar commented 2 years ago

Hi,

I've installed SyRI, I get the help and version when I run it but when I run it on actual bam file, it prompts this error.

Traceback (most recent call last): File "/home/ssa18/local/bin/syri", line 163, in <module> from syri.pyxFiles.synsearchFunctions import readCoords ModuleNotFoundError: No module named 'syri'

mnshgl0110 commented 2 years ago

It is not installed properly. What commands did you run for installing? What was the output from the install command? Can you do import syri in a python console?

ssamberkar commented 2 years ago

I could import it once I deactivated my conda environment.