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schneebergerlab / syri

Synteny and Rearrangement Identifier
https://schneebergerlab.github.io/syri/
MIT License
306 stars 36 forks source link

VCF4.2 #150

Closed zhoudreames closed 1 year ago

zhoudreames commented 2 years ago

I only need INS and DEL information， but the software requires the VCF4.2 format. can I get the VCF4.2 output result with syri ?

zhoudreames commented 2 years ago

@mnshgl0110 I am so sorry to disturb you, could you help me? thanks

mnshgl0110 commented 2 years ago

Which tool are you trying to use? You can try changing the first line in the syri.vcf from ##fileformat=VCFv4.3 to ##fileformat=VCFv4.2. Most probably, that would already work.