Hello
I wang to plot only a specific region. So my command is: software/plotsr/bin/plotsr --sr 03.syri.out --genomes 04.genomes.txt --reg B:Chr1:150000000-191956155 -o 1.Chr1fission.output_plot.pdf. But I can not get the Transloction around 160M on the Chr1. However the Transloction can be plotted when I use --chr Chr1 with the command：software/plotsr/bin/plotsr --sr 03.syri.out --genomes 04.genomes.txt --chr Chr1 -o 1.Chr1fission.output_plot.pdf.
Could you give me any suggestions?
Thanks very much!
mnshgl0110
commented
1 year ago
Hello I wang to plot only a specific region. So my command is:
software/plotsr/bin/plotsr --sr 03.syri.out --genomes 04.genomes.txt --reg B:Chr1:150000000-191956155 -o 1.Chr1fission.output_plot.pdf. But I can not get the Transloction around 160M on the Chr1. However the Transloction can be plotted when I use --chr Chr1 with the command：software/plotsr/bin/plotsr --sr 03.syri.out --genomes 04.genomes.txt --chr Chr1 -o 1.Chr1fission.output_plot.pdf.Could you give me any suggestions? Thanks very much!