ImportError: libicui18n.so.56: cannot open shared object file: No such file or directory

[hrpelg]

Hi,

I am getting this following error. Any ideas what is missing from my installation. I installed syri using conda

multiprocessing.pool.RemoteTraceback: """ Traceback (most recent call last): File "/workspace/appscratch/miniconda/syri_env/lib/python3.8/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, *kwds)) File "/workspace/appscratch/miniconda/syri_env/lib/python3.8/multiprocessing/pool.py", line 48, in mapstar return list(map(args)) File "syri/pyxFiles/synsearchFunctions.pyx", line 551, in syri.synsearchFunctions.syri File "syri/pyxFiles/inversions.pyx", line 584, in syri.inversions.getInversions File "syri/pyxFiles/inversions.pyx", line 98, in syri.inversions.getProfitable File "syri/pyxFiles/function.pxd", line 145, in syri.pyxFiles.function.getConnectivityGraph File "/workspace/appscratch/miniconda/syri_env/lib/python3.8/site-packages/igraph/init.py", line 34, in from igraph._igraph import * ImportError: libicui18n.so.56: cannot open shared object file: No such file or directory

Cheers

[mnshgl0110]

One of the syri's dependence (python-igraph) is not installed properly. Installing it should resolve the issue. Re-installing syri using conda would be the easiest solution.

[wrengs]

Hi Elena,

Adding to the previous comment. Within your activated syri_env, use conda install python-igraph. This fixed the same error for me.

Cheers