schnitzer-lab / EXTRACT-public

EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time series from both one-photon and two-photon calcium imaging movies.
MIT License
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tutorial for reading in NWB files into EXTRACT pipeline #13

Closed cechava closed 2 years ago

cechava commented 2 years ago

Created tutorial showing how to read in an NWB file, specify parameters, and run EXTRACT pipeline.

bendichter commented 2 years ago

@fatihdinc this is good to go!