Description:
Enhance the summary report script to calculate statistical variations between samples. This could include generating boxplots of contamination ratios by plasmid and calculating relevant statistics such as p-values or quantiles. The goal is to provide users with a deeper understanding of the variation in contamination levels across different samples and plasmids.
Tasks:
[x] Extend the summary report script to calculate and visualize variation between samples.
[x] Implement boxplots for contamination ratios grouped by plasmid.
[x] Calculate p-values, quantiles, or other relevant statistics for the contamination data.
[x] Integrate these new features into the existing summary report workflow.
Description: Enhance the summary report script to calculate statistical variations between samples. This could include generating boxplots of contamination ratios by plasmid and calculating relevant statistics such as p-values or quantiles. The goal is to provide users with a deeper understanding of the variation in contamination levels across different samples and plasmids.
Tasks: