scholl-lab / vcf-filtering

A collection of scripts for filtering annotated variant call format files
MIT License
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Feature request: Filtering Presets for Main Script #37

Open berntpopp opened 1 month ago

berntpopp commented 1 month ago

Description

Add filtering presets to the main script to provide users with predefined sets of filters for common use cases. This will simplify the process of running the script with commonly used filter configurations and make it more user-friendly.

Tasks

  1. Identify common filtering use cases and define corresponding filter presets.
  2. Update the main script to include these presets as selectable options.
  3. Add documentation for the new presets, including usage examples.
  4. Test the script to ensure the presets work as expected.

Benefits