schrodinger / coordgenlibs

Schrodinger-developed 2D Coordinate Generation
BSD 3-Clause "New" or "Revised" License
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Undefined Reference in Libcoordgen #78

Open SiverJohn opened 3 years ago

SiverJohn commented 3 years ago

Hello, I received the below error in the libcoordgen.so.1 file when attempting to compile Rdkit from scratch (both recent versions 2019_3 and 2020_3) and using both v1.2.4 of maeparser and v1.4.2 of coordgenlibs. I would also receive an error when using the earlier 2019_1 rdkit version in python with from rdkit import Chem Rolling back to maeparser v1.2.3 appeared to fix the issue within libcoordgen. Just rolling back coordgenlibs, did not fix the issue however.

undefined reference toschrodinger::mae::Block::getIndexedBlock(std::__cxx11::basic_string<char, std::char_traits, std::allocator > const&)'`

Just for completeness I am running Arch Linux and am willing to provide any more information upon request.