schrodinger / pymol-open-source

Open-source foundation of the user-sponsored PyMOL molecular visualization system.
https://pymol.org/
Other
1.2k stars 281 forks source link

Cgo plane hidden after ray tracing #184

Closed smutao closed 2 years ago

smutao commented 3 years ago

Hello developers, I'm currently using some cgo plane for making figures of a structure by referring to "https://pymolwiki.org/index.php/Plane_Wizard".

I found an issue with the colored planes that after ray tracing the planes in the behind will be hidden by the planes in the front. Is there any solution to this?

Before ray tracing, I got: Screen Shot 2021-06-01 at 5 35 33 PM

After ray tracing, I got: Screen Shot 2021-06-01 at 5 35 41 PM

Many thanks!

JarrettSJohnson commented 2 years ago

Sorry for the very long wait, but I believe I was able to recreate. set transparency_mode, 3 to turn on multilayer transparency seemed to do the job.

smutao commented 2 years ago

Hi Jarrett, many thanks for the suggestion. This command solved my issue. 🤝