Closed rojinsafavi closed 3 years ago
Hi,
the difference is mainly that the genemap2.txt
contains all OMIM disease genes while the genemap_search_cancer.txt
file only contains those specifically associated with cancer. I'm not 100% sure if genemap2.txt
is a superset of the cancer-specific list (which I assume it is and it should be) so I left both in. Also, I tried several different approaches for more strict and lenient filtering so it's possible that genemap_search_cancert.txt
could be removed from the code.
I might have a look into this soon but currently I don't have much time.
Thanks @schulter , I think genemap_search_cancert.txt is a subset of genemap2.txt. I will close the issue now!
Could you please elaborate the difference between "genemap_search_cancer.txt" and "genemap2.txt"? I am not sure where I can find the first one