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schveiguy / fastaq

FastA/Q parser based on iopipe
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Make all-in-one file for parsing, manipulating, and writing fasta data #1

Closed biocyberman closed 6 years ago

biocyberman commented 6 years ago

FASTA is a simple file format, and I think it is more convenient to make an AIO library for it. Please check the TODO list to see what I am aiming for actual use.

schveiguy commented 6 years ago

Yeah, I wasn't aware when I created this repository how different fasta and fastq really are

So it does make sense to make one parser per format, and we can probably put the common pieces into a util file or something.

I think I need to make some better generic parsing tools for iopipe -- phobos algorithms are a pain to work with.

biocyberman commented 6 years ago

I've used Perl and Python self-included FASTA libraries, therefore the choice of aiming the same usage for the D version. Thanks for the continuing work on this :)