sciai-lab / batchlib

Batch procesing for high-throughput screening data
MIT License
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Improve reporting, plots and summary table #104

Closed constantinpape closed 4 years ago

constantinpape commented 4 years ago

Just making an issue with somewhat connected points so I can keep track of this:

Improve reporting (=slackbot):

Improve plots:

Improve summary table:

wrong_col_name

@tischi: I have listed some of the points from your earlier mails here to keep track of this. You also wrote this:

4. auch der measured background in jedem Bild ist wichtig, es gaebe also zwei columns: IgG_background, IgG_background_correction, wobei der letztere der waere, der zur Berechnung herangezogen wurde.

I don't quite understand it, could you please explain what exactly the difference between _background and _background_correction is?

constantinpape commented 4 years ago

Also, add a function that takes all the summaries, properly names the files, zips them and then posts them to latest-results, to have an easier way of downloading everything.

constantinpape commented 4 years ago

Plots; fix range for color map.

constantinpape commented 4 years ago

Improved default tables in #107. Color map ranges in plots were fixed by @imagirom. Slack summaries have also been implemented.

constantinpape commented 4 years ago

This has all been taken care of now.