Note about broken docker build. sciunit is significantly different now.

[russelljjarvis]

This what I need to run in order to get docker container to run. Indicating, that the latest docker image also needs updating.

sudo /opt/conda/bin/pip uninstall sciunit
sudo /opt/conda/bin/pip install git+https://github.com/scidash/sciunit@dev

[rgerkin]

Can you add that to the Dockerfile?

[russelljjarvis]

Yes, also the allen brain glif cells require Padraigs opencortex in order to parse allen config files and to translate the parsed allen config back to NeuroML

[rgerkin]

OK, we can think about making OpenCortex a Neuronunit dependency.