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scidash / neuronunit

A package for data-driven validation of neuron and ion channel models using SciUnit
http://neuronunit.scidash.org
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Optimization #253

Closed russelljjarvis closed 3 years ago

russelljjarvis commented 3 years ago

Removed support for SCOOP, removed support for NEURON model model parameters.

Added a file very reduced_sans_lems.py which was a non LEMS/jNeuroML model path dependent way of bootstrapping models (now jithub models do this themselves).

Added in data_transport_container.py, and optimization_management.py files which have many necessary functions for performing optimization.

changed fi.py, dynamics.py, and target_spike_search.py for pragmatic reasons.

russelljjarvis commented 3 years ago

Have since updated. Will delete this PR and make another as appropriate.