search

scikit-learn-contrib / imbalanced-learn

A Python Package to Tackle the Curse of Imbalanced Datasets in Machine Learning
https://imbalanced-learn.org
MIT License
6.85k stars 1.29k forks source link

[BUG] ImportError: cannot import name '_get_column_indices' from 'sklearn.utils with pre-release versions #1080

Closed Zethson closed 6 months ago

Zethson commented 6 months ago

Describe the bug

Incompatibility with pre-release scikit-learn

Steps/Code to Reproduce

Install pre-release versions of imbalanced-learn dependencies

Import the package

Expected Results

Actual Results

/opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/init.py:12: in from ehrapy import data as dt /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/data/init.py:1: in from ehrapy.data._datasets import ( /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/data/_datasets.py:6: in from ehrapy.io._read import read_csv, read_fhir, read_h5ad /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/io/init.py:1: in from ehrapy.io._read import df_to_anndata, read_csv, read_fhir, read_h5ad /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/io/_read.py:18: in from ehrapy.preprocessing._encoding import encode /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/preprocessing/init.py:1: in from ehrapy.preprocessing._balanced_sampling import balanced_sample /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/ehrapy/preprocessing/_balanced_sampling.py:9: in from imblearn.over_sampling import RandomOverSampler /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/imblearn/init.py:52: in from . import ( /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/imblearn/combine/init.py:5: in from ._smote_enn import SMOTEENN /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/imblearn/combine/_smote_enn.py:13: in from ..over_sampling import SMOTE /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/imblearn/over_sampling/init.py:8: in from ._smote import SMOTE, SMOTEN, SMOTENC, SVMSMOTE, BorderlineSMOTE, KMeansSMOTE /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/imblearn/over_sampling/_smote/init.py:1: in from .base import SMOTE, SMOTEN, SMOTENC /opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/imblearn/over_sampling/_smote/base.py:18: in from sklearn.utils import ( E ImportError: cannot import name '_get_column_indices' from 'sklearn.utils' (/opt/hostedtoolcache/Python/3.11.9/x64/lib/python3.11/site-packages/sklearn/utils/init.py)

Versions

scikit-learn==1.5.0rc1

Zethson commented 6 months ago

Ahh this was already fixed with https://github.com/scikit-learn-contrib/imbalanced-learn/pull/1074

Then we just need the release.