scilus / scilpy

The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
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Adding msmt support to set_frf_diffusivities #896

Closed karanphil closed 7 months ago

karanphil commented 7 months ago

Quick description

I added multi-shell support to scil_frf_set_diffusivities.py. It only took a few modifcations, and single-shell works as before. This was added with the goal of running it in nf-scil. I added tests also, and a check on the format of the input new_frf.

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Type of change

Check the relevant options.

Provide data, screenshots, command line to test (if relevant)

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Checklist

pep8speaks commented 7 months ago

Hello @karanphil, Thank you for updating !

There are currently no PEP 8 issues detected in this Pull Request. Cheers! :beers:

Comment last updated at 2024-02-14 16:49:27 UTC
codecov[bot] commented 7 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Comparison is base (82b98a1) 65.92% compared to head (dedb657) 65.92%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## master #896 +/- ## ======================================= Coverage 65.92% 65.92% ======================================= Files 384 384 Lines 21331 21337 +6 Branches 3491 3492 +1 ======================================= + Hits 14063 14067 +4 - Misses 5664 5665 +1 - Partials 1604 1605 +1 ``` | [Components](https://app.codecov.io/gh/scilus/scilpy/pull/896/components?src=pr&el=components&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scilus) | Coverage Δ | | |---|---|---| | [Scripts](https://app.codecov.io/gh/scilus/scilpy/pull/896/components?src=pr&el=component&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scilus) | `∅ <ø> (∅)` | | | [Library](https://app.codecov.io/gh/scilus/scilpy/pull/896/components?src=pr&el=component&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scilus) | `∅ <ø> (∅)` | |