[WIP] Add scripts for MRDS metrics along bundle

[ErickHernandezGutierrez]

Quick description

Added two scripts to perform MRDS metrics along bundle. The scripts are a mod of the scripts to perform AFD metric along bundle.

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Type of change

Check the relevant options.

• [ ] Bug fix (non-breaking change which fixes an issue)
• [X] New feature (non-breaking change which adds functionality)
• [ ] Breaking change (fix or feature that would cause existing functionality to not work as expected)
• [ ] This change requires a documentation update

Provide data, screenshots, command line to test (if relevant)

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Checklist

• [] My code follows the style guidelines of this project (run autopep8)
• [X] I added relevant citations to scripts, modules and functions docstrings and descriptions
• [X] I have performed a self-review of my code
• [X] I have commented my code, particularly in hard-to-understand areas
• [X] I have made corresponding changes to the documentation
• [X] My changes generate no new warnings
• [ ] I moved all functions from the script file (except the argparser and main) to scilpy modules
• [ ] I have added tests that prove my fix is effective or that my feature works
• [ ] New and existing unit tests pass locally with my changes

[pep8speaks]

Hello @ErickHernandezGutierrez, Thank you for updating !

• In the file scilpy/reconst/lobe_mrds_metrics_along_streamlines.py:

Line 55:80: E501 line too long (85 > 79 characters) Line 99:57: E231 missing whitespace after ',' Line 99:76: E231 missing whitespace after ',' Line 99:80: E501 line too long (100 > 79 characters) Line 99:95: E231 missing whitespace after ',' Line 99:98: E231 missing whitespace after ','

• In the file scripts/scil_compute_mean_fixel_lobe_mrds_metric_from_bundles.py:

Line 12:74: W291 trailing whitespace Line 13:80: E501 line too long (87 > 79 characters) Line 14:80: E501 line too long (81 > 79 characters) Line 84:68: W291 trailing whitespace

• In the file scripts/scil_mrds_compute_todi.py:

Line 3:10: E231 missing whitespace after ',' Line 3:10: E401 multiple imports on one line Line 3:19: E231 missing whitespace after ',' Line 5:80: E501 line too long (96 > 79 characters) Line 6:80: E501 line too long (85 > 79 characters) Line 10:80: E501 line too long (96 > 79 characters) Line 11:80: E501 line too long (142 > 79 characters) Line 12:80: E501 line too long (92 > 79 characters) Line 13:80: E501 line too long (82 > 79 characters) Line 14:80: E501 line too long (121 > 79 characters) Line 31:70: E231 missing whitespace after ',' Line 31:78: E231 missing whitespace after ',' Line 31:80: E501 line too long (91 > 79 characters) Line 31:83: E231 missing whitespace after ',' Line 33:19: E201 whitespace after '(' Line 33:28: E202 whitespace before ')' Line 37:80: E501 line too long (101 > 79 characters) Line 37:81: E231 missing whitespace after ',' Line 37:90: E231 missing whitespace after ',' Line 38:1: W293 blank line contains whitespace Line 39:79: E231 missing whitespace after ',' Line 39:80: E501 line too long (89 > 79 characters) Line 41:44: E231 missing whitespace after ',' Line 43:34: W292 no newline at end of file

• In the file scripts/scil_mrds_modsel_todi.py:

Line 3:11: E401 multiple imports on one line Line 12:80: E501 line too long (103 > 79 characters) Line 13:80: E501 line too long (95 > 79 characters) Line 31:9: E221 multiple spaces before operator Line 33:10: E221 multiple spaces before operator Line 34:8: E221 multiple spaces before operator Line 35:5: E221 multiple spaces before operator Line 38:21: E201 whitespace after '(' Line 38:34: E202 whitespace before ')' Line 41:2: E231 missing whitespace after ',' Line 41:4: E231 missing whitespace after ',' Line 41:6: E221 multiple spaces before operator Line 52:22: E231 missing whitespace after ',' Line 52:24: E231 missing whitespace after ',' Line 55:13: E221 multiple spaces before operator Line 55:30: E231 missing whitespace after ',' Line 55:32: E231 missing whitespace after ',' Line 55:34: E231 missing whitespace after ',' Line 56:30: E231 missing whitespace after ',' Line 56:32: E231 missing whitespace after ',' Line 56:34: E231 missing whitespace after ',' Line 57:14: E221 multiple spaces before operator Line 57:30: E231 missing whitespace after ',' Line 57:32: E231 missing whitespace after ',' Line 57:34: E231 missing whitespace after ',' Line 58:12: E221 multiple spaces before operator Line 58:30: E231 missing whitespace after ',' Line 58:32: E231 missing whitespace after ',' Line 59:9: E221 multiple spaces before operator Line 59:30: E231 missing whitespace after ',' Line 59:32: E231 missing whitespace after ',' Line 59:34: E231 missing whitespace after ',' Line 62:28: E201 whitespace after '(' Line 62:37: E231 missing whitespace after ',' Line 62:46: E231 missing whitespace after ',' Line 62:55: E202 whitespace before ')' Line 63:7: E231 missing whitespace after ',' Line 63:9: E231 missing whitespace after ',' Line 64:14: E231 missing whitespace after ',' Line 64:16: E231 missing whitespace after ',' Line 65:22: E231 missing whitespace after ',' Line 65:24: E231 missing whitespace after ',' Line 71:27: E231 missing whitespace after ',' Line 71:29: E231 missing whitespace after ',' Line 71:31: E231 missing whitespace after ',' Line 71:34: E221 multiple spaces before operator Line 71:53: E231 missing whitespace after ',' Line 71:55: E231 missing whitespace after ',' Line 71:57: E231 missing whitespace after ',' Line 72:30: E231 missing whitespace after ',' Line 72:32: E231 missing whitespace after ',' Line 72:34: E231 missing whitespace after ',' Line 72:56: E231 missing whitespace after ',' Line 72:58: E231 missing whitespace after ',' Line 72:60: E231 missing whitespace after ',' Line 73:28: E231 missing whitespace after ',' Line 73:30: E231 missing whitespace after ',' Line 73:32: E231 missing whitespace after ',' Line 73:35: E221 multiple spaces before operator Line 73:54: E231 missing whitespace after ',' Line 73:56: E231 missing whitespace after ',' Line 73:58: E231 missing whitespace after ',' Line 74:26: E231 missing whitespace after ',' Line 74:28: E231 missing whitespace after ',' Line 74:31: E221 multiple spaces before operator Line 74:56: E231 missing whitespace after ',' Line 74:58: E231 missing whitespace after ',' Line 75:23: E231 missing whitespace after ',' Line 75:25: E231 missing whitespace after ',' Line 75:27: E231 missing whitespace after ',' Line 75:30: E221 multiple spaces before operator Line 75:49: E231 missing whitespace after ',' Line 75:51: E231 missing whitespace after ',' Line 75:53: E231 missing whitespace after ',' Line 78:10: E201 whitespace after '(' Line 78:80: E501 line too long (124 > 79 characters) Line 78:93: E221 multiple spaces before operator Line 78:108: E231 missing whitespace after ',' Line 78:115: E231 missing whitespace after ',' Line 78:123: E202 whitespace before ')' Line 79:10: E201 whitespace after '(' Line 79:80: E501 line too long (124 > 79 characters) Line 79:95: E221 multiple spaces before operator Line 79:108: E231 missing whitespace after ',' Line 79:115: E231 missing whitespace after ',' Line 79:123: E202 whitespace before ')' Line 80:10: E201 whitespace after '(' Line 80:80: E501 line too long (124 > 79 characters) Line 80:93: E221 multiple spaces before operator Line 80:108: E231 missing whitespace after ',' Line 80:115: E231 missing whitespace after ',' Line 80:123: E202 whitespace before ')' Line 81:10: E201 whitespace after '(' Line 81:80: E501 line too long (124 > 79 characters) Line 81:92: E221 multiple spaces before operator Line 81:108: E231 missing whitespace after ',' Line 81:115: E231 missing whitespace after ',' Line 81:123: E202 whitespace before ')' Line 82:10: E201 whitespace after '(' Line 82:80: E501 line too long (124 > 79 characters) Line 82:108: E231 missing whitespace after ',' Line 82:115: E231 missing whitespace after ',' Line 82:123: E202 whitespace before ')'