scipion-em / scipion-em-tomo

Base tomography Scipion plugin with data model definition
GNU General Public License v3.0
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Import CTF - unable to import the CTFs from reliontomo test dataset #446

Open JorMaister opened 7 months ago

JorMaister commented 7 months ago

Description:

Screenshot from 2024-01-22 11-08-05 run.stderr.txt run.stdout.txt

azazellochg commented 7 months ago

thank you @JorMaister , I'll have a look

JorMaister commented 7 months ago

Update:

I noticed that in the case of TS_03, the defocus file has 40 lines, while the TS has 41 angles, and that is the cause of the error... We're adding the code the capability to allow the importing of TS and CTF considering the exclude views if there are any. It does not solve this problem as we don't now in this case whch view was excluded, but may cover the rest of the cases. I suggest to skip the CTFs in which this size mismatching is found and report the user in the summary or something. I can do it myself if you want, @azazellochg.

azazellochg commented 7 months ago

sure, go ahead, you will fix it faster than me :)

JorMaister commented 7 months ago

Ok then, I'll assign this issue to myself.