Add acquistion order attribute to the CTFTomo to provide a robust matching between tilt-images and CTFTomos.
Add method getTsIds to SetOfTomograms (useful when importing coordinates).
CTFTomoSeries: add method getCtfTomoFromTi.
CTFTomo: add acqOrder to the attributes list used on its copy method.
TiltSeriesBase - method generateTltFile expanded: optional input presentAcqOrders to manage the view exclusion.
Utils - add method getCommonTsAndCtfElements to intersect tilt images and CTFs based on the value of the
attribute acquisition order, or index in case it's not present or empty (backwards compatibility)
SetOfCTFTomoSeries: add method getTSIds, just the same as for SetOfTiltSeries and SetOfCoordinates3D.
Method getTSIds methods simplified. They call now getUniqueValues instead of aggregate.
Developers: