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scipion-em / scipion-pyworkflow

Underlying pyworkflow module for the Scipion framework
GNU General Public License v3.0
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projects error #484

Closed azazellochg closed 10 months ago

azazellochg commented 10 months ago

"We have recently had to upgrade to a newer Scipion version (v3.3.0) in SBGRID. FYI, associated packages are on these versions:

scipion-app 3.3.0 scipion-em 3.3.1 scipion-pyworkflow 3.3.1

The problem is that we create and schedule projects using templates, ie:

$ scipion3 python -m pyworkflow.project.scripts.create PROJECT TEMPLATE.json

$ scipion3 python -m pyworkflow.project.scripts.schedule PROJECT

Previously this worked fine, but the created projects are now giving an AttributeError with the newer version of Scipion when they are run, reset or loaded":

  File "/home/me/.local/lib/python3.8/site-packages/pyworkflow/project/project.py", line 513, in _fixProtParamsConfiguration

    pointer.set(self.getRunsGraph().getNode(str(pointer.get().getObjParentId())).run)

AttributeError: 'NoneType' object has no attribute 'getObjParentId'
pconesa commented 10 months ago

CAn we have access to the template?