a bug for countReads outputDir NA

scottzijiezhang / RADAR

The project for analyzing differential methylation of MeRIP-seq data

GNU General Public License v3.0

19 stars 8 forks source link

Open gnilihzeux opened 4 years ago

gnilihzeux commented 4 years ago

It's a bug in your countReads.R. But the same script is more robust in package:MeRIPtools. May you should update it.

But some bug is still in MeRIPtools::countReads not for RADAR::countReads, there is the error:

Using 16 thread(s) to count reads in continuous bins...
Error in (function (x)  : attempt to apply non-function

scottzijiezhang commented 4 years ago

Hello user, Thank you for your interested in using RADAR. I have changed the code for saving data to follow the MeRIPtools.