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scratcharchive / mountainsort_examples

Examples of using MountainSort spike sorting software.
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Cannot install spikeforestwidgets #26

Open holmescharles opened 4 years ago

holmescharles commented 4 years ago

I am trying to install everything per the README so I can work with the Jupyter examples.

When I get to the step where I am supposed to install spikeforestwidgets, I get a PackagesNotFoundError.

What am I doing wrong?

conda install -c flatiron -c conda-forge spikeforestwidgets
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Collecting package metadata (repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.

PackagesNotFoundError: The following packages are not available from current channels:

  - spikeforestwidgets

Current channels:

  - https://conda.anaconda.org/flatiron/osx-64
  - https://conda.anaconda.org/flatiron/noarch
  - https://conda.anaconda.org/conda-forge/osx-64
  - https://conda.anaconda.org/conda-forge/noarch
  - https://repo.anaconda.com/pkgs/main/osx-64
  - https://repo.anaconda.com/pkgs/main/noarch
  - https://repo.anaconda.com/pkgs/r/osx-64
  - https://repo.anaconda.com/pkgs/r/noarch

To search for alternate channels that may provide the conda package you're
looking for, navigate to

    https://anaconda.org

and use the search bar at the top of the page.
atayl140 commented 4 years ago

I am having the same issues, except I'm getting that error message for all the packages. Have you figured it out?

holmescharles commented 4 years ago

Nope.

magland commented 4 years ago

I have not used those conda packages in quite some time -- I use the pip-installable ml_ms4alg python directly -- also I would recommend using the spikeinterface package (https://github.com/SpikeInterface). If it helps, the spikeforestwidgets conda package should not be needed for spike sorting. Not sure why download is not working for you -- I just created a new conda environment and tried "conda install -c flatiron spikeforestwidgets" and "conda install -c flatiron ml_ms4alg" and those worked.

holmescharles commented 4 years ago

I had already decided to use another spike sorter, so I'm not interested in figuring this out. However, I'll leave it open in case anyone else is struggling and needs it resolved. I'll leave it to you to close it.

Thanks!