improve manual labeling correction script

sct-pipeline / csa-atrophy

Evaluate the sensitivity of atrophy detection with SCT

https://csa-atrophy.readthedocs.io/

MIT License

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improve manual labeling correction script #23

Closed PaulBautin closed 4 years ago

PaulBautin commented 4 years ago

Up to now, user must enter filenames in '"/manual_labeling_correction.sh" script to manually correct errors of labeling. This can be avoided if user enters filenames in an external "yaml" file. This issue will be addressed based on PR https://github.com/sct-pipeline/spine-generic/pull/87 still in development.

TODO:

create yaml parser in "/manual_labeling_correction.sh"
update README to explain use of yaml file to user
update comments in "/manual_labeling_correction.sh"

PaulBautin commented 4 years ago

Issue can be closed because it has been answered through PR #25.