sct-pipeline / csa-atrophy

Evaluate the sensitivity of atrophy detection with SCT
https://csa-atrophy.readthedocs.io/
MIT License
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segment twice when rescale=1 #35

Closed PaulBautin closed 4 years ago

PaulBautin commented 4 years ago

When computing stats for rescale=1 ==> perc_diff=0. This is not a normal behavior. When image is transformed it is re-segmented this not the case when rescale=1 which explains perc_diff=0. Image must be segmented twice (for rescale 1)to account for the variation of CSA due to image transformation. Name one segmentation "gt" and the other "1.0"