batch log output at the wrong location

sct-pipeline / csa-atrophy

Evaluate the sensitivity of atrophy detection with SCT

https://csa-atrophy.readthedocs.io/

MIT License

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batch log output at the wrong location #62

Closed jcohenadad closed 4 years ago

jcohenadad commented 4 years ago

When running batches via run_all, i don't see the sct_run_batch.log file under log/ anymore.

after looking around, i realized that now the log files are output in the current folder, as opposed to under output_path/log/ as was the case before.

@PaulBautin could you please change it so we keep the previous behaviour?