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sct-pipeline / fmri-segmentation

Repository for the project on automatic spinal cord segmentation based on fMRI EPI data
MIT License
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Comparison with different methods with our fmri sc segmentation model #43

Open rohanbanerjee opened 5 months ago

rohanbanerjee commented 5 months ago

This issue is to track the qualitative and quantitative comparisons of different spinal cord segmentation models -- sct_deepseg_sc, sct_propseg, sct_deepseg -task seg_sc_epi and sct_deepseg -task seg_sc_contrast_agnostic.

I am using this script to run the models on the held-out_test data and generate the QCs.