sct-pipeline / ukbiobank-spinalcord-csa

Measure of the averaged cross-sectional area (cord CSA) between C2 and C3 of the spinal cord with UK Biobank Brain MRI dataset.
MIT License
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Adjust statistical analysis for the updated pipeline and exploration #74

Closed sandrinebedard closed 3 years ago

sandrinebedard commented 3 years ago

Description

This PR includes various modifications of get_subject_info.py and compute_stats.py to address #50 and to add new parameters and results for exploration of the CSA results of the first 1000 subjects.

Main changes include:

Linked issue

Closes #50

jcohenadad commented 3 years ago

Gender- CSA analysis (mean CSA per gender + T-Test +plots)

I would call it Sex (which is the biological male/female definition that we are referring to here, while the term "gender" refers to the identity and social construct, see here)

sandrinebedard commented 3 years ago

I also generated the scatterplot sperated for sex so we can see its effect on each parameter for fun 😊: image

jcohenadad commented 3 years ago

I also generated the scatterplot sperated for sex so we can see its effect on each parameter for fun 😊: image

wow, super interesting!!