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scverse / genomic-features

Genomic Features in Python from BioConductor's AnnotationHub
https://genomic-features.readthedocs.io
BSD 3-Clause "New" or "Revised" License
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filter argument #10

Closed ivirshup closed 1 year ago

ivirshup commented 1 year ago

Description of feature

genes, transcripts, etc. should have a filter argument. We should be able to pass filter objects (as defined in #6) here that reduce the entries returned.

We could also allow passing ibis expressions here (at least at first, until all filter classes are defined)

ivirshup commented 1 year ago

Filters need to be able to perform implicit joins, e.g. filter genes by transcript ID