scverse / genomic-features

Genomic Features in Python from BioConductor's AnnotationHub
https://genomic-features.readthedocs.io
BSD 3-Clause "New" or "Revised" License
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Initial columns functions #22

Closed lauradmartens closed 1 year ago

lauradmartens commented 1 year ago

Fixes #9 when finished and partly #6 for discoverability of columns

lauradmartens commented 1 year ago
codecov-commenter commented 1 year ago

Codecov Report

Merging #22 (484af92) into main (0acfba3) will increase coverage by 2.05%. The diff coverage is 90.47%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #22 +/- ## ========================================== + Coverage 88.40% 90.45% +2.05% ========================================== Files 6 6 Lines 138 241 +103 ========================================== + Hits 122 218 +96 - Misses 16 23 +7 ``` | [Impacted Files](https://codecov.io/gh/scverse/genomic-features/pull/22?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse) | Coverage Δ | | |---|---|---| | [src/genomic\_features/\_core/filters.py](https://codecov.io/gh/scverse/genomic-features/pull/22?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL2dlbm9taWNfZmVhdHVyZXMvX2NvcmUvZmlsdGVycy5weQ==) | `89.47% <ø> (+3.94%)` | :arrow_up: | | [src/genomic\_features/ensembl/ensembldb.py](https://codecov.io/gh/scverse/genomic-features/pull/22?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL2dlbm9taWNfZmVhdHVyZXMvZW5zZW1ibC9lbnNlbWJsZGIucHk=) | `90.25% <90.47%> (+0.06%)` | :arrow_up: |
lauradmartens commented 1 year ago
lauradmartens commented 1 year ago

This test needs to be checked: https://github.com/scverse/genomic-features/blob/45d97ac1d586c7c11bfa54afb8e1445ef1e5cab6/tests/test_columns.py#L79