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scverse / mudata

Multimodal Data (.h5mu) implementation for Python
https://mudata.rtfd.io
BSD 3-Clause "New" or "Revised" License
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Reindexing only valid with uniquely valued Index objects #67

Open raozuming opened 4 months ago

raozuming commented 4 months ago

Describe the bug mudata v.0.2.3 version, anndata v0.9.2, calling mudata.update(), causing anadata data update failure, confirming that there are no duplicate data in the original data, generating duplicate data in line 799 now_index = pd.Index(now_values), triggering line 801 index_order = prev_index.get_indexer(now_index), pandas.errors.InvalidIndexError: Reindexing only valid with uniquely valued Index objects

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gtca commented 4 months ago

Do you have any steps to reproduce that, @raozuming?