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scverse / scanpy

Single-cell analysis in Python. Scales to >1M cells.
https://scanpy.readthedocs.io
BSD 3-Clause "New" or "Revised" License
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dotplot external labels in notebook #2270

Closed wangjiawen2013 closed 2 years ago

wangjiawen2013 commented 2 years ago

Hi, I am using scanpy 1.9.1 following this tutorial: https://scanpy-tutorials.readthedocs.io/en/latest/plotting/core.html I find that scanpy cannot display the bar under each leiden number, the follwing is figures on the tutorial, but in fact the bar disappeared when I tried the code, and this is also the case in other plots on the tutorial plotting_core_59_0

wangjiawen2013 commented 2 years ago

May be it's a bug of my jupyter notebook, nothing related with scanpy.

ivirshup commented 2 years ago

Can you share some plots of what you're generating? I can't reproduce what you're describing.

wangjiawen2013 commented 2 years ago

Now it's ok, I thinks it's a bug of my jupternotebook and vscode.