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scverse / scanpy

Single-cell analysis in Python. Scales to >1M cells.
https://scanpy.readthedocs.io
BSD 3-Clause "New" or "Revised" License
1.93k stars 603 forks source link

Backport PR #3380: Use deprecation decorator #3382

Closed flying-sheep closed 11 hours ago

codecov[bot] commented 11 hours ago

Codecov Report

Attention: Patch coverage is 90.90909% with 1 line in your changes missing coverage. Please review.

Project coverage is 77.27%. Comparing base (7768360) to head (b8108d9). Report is 1 commits behind head on 1.10.x.

Files with missing lines Patch % Lines
src/scanpy/_compat.py 80.00% 1 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## 1.10.x #3382 +/- ## ======================================= Coverage 77.26% 77.27% ======================================= Files 109 109 Lines 12426 12433 +7 ======================================= + Hits 9601 9607 +6 - Misses 2825 2826 +1 ``` | [Files with missing lines](https://app.codecov.io/gh/scverse/scanpy/pull/3382?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse) | Coverage Δ | | |---|---|---| | [src/scanpy/plotting/\_preprocessing.py](https://app.codecov.io/gh/scverse/scanpy/pull/3382?src=pr&el=tree&filepath=src%2Fscanpy%2Fplotting%2F_preprocessing.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL3NjYW5weS9wbG90dGluZy9fcHJlcHJvY2Vzc2luZy5weQ==) | `87.71% <100.00%> (+0.21%)` | :arrow_up: | | [...preprocessing/\_deprecated/highly\_variable\_genes.py](https://app.codecov.io/gh/scverse/scanpy/pull/3382?src=pr&el=tree&filepath=src%2Fscanpy%2Fpreprocessing%2F_deprecated%2Fhighly_variable_genes.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL3NjYW5weS9wcmVwcm9jZXNzaW5nL19kZXByZWNhdGVkL2hpZ2hseV92YXJpYWJsZV9nZW5lcy5weQ==) | `95.55% <100.00%> (+0.04%)` | :arrow_up: | | [src/scanpy/preprocessing/\_simple.py](https://app.codecov.io/gh/scverse/scanpy/pull/3382?src=pr&el=tree&filepath=src%2Fscanpy%2Fpreprocessing%2F_simple.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL3NjYW5weS9wcmVwcm9jZXNzaW5nL19zaW1wbGUucHk=) | `88.67% <100.00%> (ø)` | | | [src/scanpy/\_compat.py](https://app.codecov.io/gh/scverse/scanpy/pull/3382?src=pr&el=tree&filepath=src%2Fscanpy%2F_compat.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL3NjYW5weS9fY29tcGF0LnB5) | `77.35% <80.00%> (+0.27%)` | :arrow_up: |

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