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scverse / scirpy

A scanpy extension to analyse single-cell TCR and BCR data.
https://scirpy.scverse.org/en/latest/
BSD 3-Clause "New" or "Revised" License
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Chain_qc adaptation (isotypically included B cells) #537

Closed MKanetscheider closed 3 months ago

MKanetscheider commented 3 months ago

Closes #... Enable labeling of isotypically included B cells as receptor_subtype

grst commented 3 months ago

Happy to include this! The corresponding test case is here, should be relatively easy to adapt: https://github.com/scverse/scirpy/blob/6160f375d59ca299577040904141ca0b0ee8a832/src/scirpy/tests/test_tools.py#L19

All the existing tests should pass and there should be at least one case of an isotypicall included B cell tested.