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scverse / scvi-tools

Deep probabilistic analysis of single-cell and spatial omics data
http://scvi-tools.org/
BSD 3-Clause "New" or "Revised" License
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Backport PR #2936 on branch 1.2.x (feat(train) Add support for categorial covariates in scArches) #2964

Closed meeseeksmachine closed 2 months ago

meeseeksmachine commented 2 months ago

Backport PR #2936: feat(train) Add support for categorial covariates in scArches

codecov[bot] commented 2 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 85.30%. Comparing base (5aabbe4) to head (9524351). Report is 1 commits behind head on 1.2.x.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## 1.2.x #2964 +/- ## ======================================= Coverage 85.30% 85.30% ======================================= Files 167 167 Lines 14371 14369 -2 ======================================= - Hits 12259 12258 -1 + Misses 2112 2111 -1 ``` | [Files with missing lines](https://app.codecov.io/gh/scverse/scvi-tools/pull/2964?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse) | Coverage Δ | | |---|---|---| | [src/scvi/model/base/\_archesmixin.py](https://app.codecov.io/gh/scverse/scvi-tools/pull/2964?src=pr&el=tree&filepath=src%2Fscvi%2Fmodel%2Fbase%2F_archesmixin.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL3NjdmkvbW9kZWwvYmFzZS9fYXJjaGVzbWl4aW4ucHk=) | `92.07% <100.00%> (-0.10%)` | :arrow_down: | ... and [1 file with indirect coverage changes](https://app.codecov.io/gh/scverse/scvi-tools/pull/2964/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse)