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scverse / scvi-tools

Deep probabilistic analysis of single-cell and spatial omics data
http://scvi-tools.org/
BSD 3-Clause "New" or "Revised" License
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Fix warning for DA function in MrVI #2999

Closed justjhong closed 1 month ago

justjhong commented 2 months ago

Mentioned in https://discourse.scverse.org/t/error-in-mrvi-differential-abundance/2486

codecov[bot] commented 2 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 84.36%. Comparing base (f1f58b9) to head (02e5cd2). Report is 1 commits behind head on main.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #2999 +/- ## ========================================== - Coverage 84.81% 84.36% -0.46% ========================================== Files 167 167 Lines 14490 14490 ========================================== - Hits 12290 12224 -66 - Misses 2200 2266 +66 ``` | [Files with missing lines](https://app.codecov.io/gh/scverse/scvi-tools/pull/2999?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse) | Coverage Δ | | |---|---|---| | [src/scvi/external/mrvi/\_model.py](https://app.codecov.io/gh/scverse/scvi-tools/pull/2999?src=pr&el=tree&filepath=src%2Fscvi%2Fexternal%2Fmrvi%2F_model.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL3NjdmkvZXh0ZXJuYWwvbXJ2aS9fbW9kZWwucHk=) | `7.72% <ø> (ø)` | | ... and [1 file with indirect coverage changes](https://app.codecov.io/gh/scverse/scvi-tools/pull/2999/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse)