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scverse / scvi-tools

Deep probabilistic analysis of single-cell and spatial omics data
http://scvi-tools.org/
BSD 3-Clause "New" or "Revised" License
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Backport PR #3007 on branch 1.2.x (Change outlier detection for MRVI to ball admissibility calculation) #3009

Closed meeseeksmachine closed 1 month ago

meeseeksmachine commented 1 month ago

Backport PR #3007: Change outlier detection for MRVI to ball admissibility calculation

codecov[bot] commented 1 month ago

Codecov Report

Attention: Patch coverage is 12.50000% with 7 lines in your changes missing coverage. Please review.

Project coverage is 84.40%. Comparing base (4985bb3) to head (2573c6a). Report is 1 commits behind head on 1.2.x.

Files with missing lines Patch % Lines
src/scvi/external/mrvi/_model.py 12.50% 7 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## 1.2.x #3009 +/- ## ========================================== + Coverage 84.36% 84.40% +0.04% ========================================== Files 167 167 Lines 14490 14494 +4 ========================================== + Hits 12224 12234 +10 + Misses 2266 2260 -6 ``` | [Files with missing lines](https://app.codecov.io/gh/scverse/scvi-tools/pull/3009?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse) | Coverage Δ | | |---|---|---| | [src/scvi/external/mrvi/\_model.py](https://app.codecov.io/gh/scverse/scvi-tools/pull/3009?src=pr&el=tree&filepath=src%2Fscvi%2Fexternal%2Fmrvi%2F_model.py&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse#diff-c3JjL3NjdmkvZXh0ZXJuYWwvbXJ2aS9fbW9kZWwucHk=) | `7.85% <12.50%> (+0.13%)` | :arrow_up: | ... and [1 file with indirect coverage changes](https://app.codecov.io/gh/scverse/scvi-tools/pull/3009/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=scverse)