updated multivi tutorials with mudata and minification - Githubissues

scverse / scvi-tutorials

Notebooks used in scvi-tools tutorials

https://docs.scvi-tools.org/en/stable/tutorials/index.html

BSD 3-Clause "New" or "Revised" License

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updated multivi tutorials with mudata and minification #370

Open ori-kron-wis opened 2 days ago

ori-kron-wis commented 2 days ago

Formatting

[x] My tutorial has only one top-level (#) header

Reproducibility

[x] My tutorial works on Google Colab
[x] My tutorial sets scvi.settings.seed = 0 at the beginning of the notebook
[x] My tutorial has been run and includes outputs (e.g. plots, tables)

Other

[ ] Counts and normalized data should co-exist in the datasets, see the API overview for an example
[ ] For scRNA-seq data, normalization should be counts per median library size and then log1p transformed -- if not, a reason should be given

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