scverse / spatialdata-notebooks

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Query notebook expects Visium data different from the one in S3 #54

Closed LucaMarconato closed 7 months ago

LucaMarconato commented 1 year ago
          @LucaMarconato when downloading the data set from the link in the notebook (https://s3.embl.de/spatialdata/spatialdata-sandbox/visium.zip) I think I get different data than the one used in the notebook. Bc the coordinate systems are named ST8059048 and ST8059049 and in the original notebook it's ST8059050 and ST8059051. The plots also look slightly different.

It doesn't matter for the bugfix but I just thought I'd let you know bc I also didn't find the correct dataset

Originally posted by @Sonja-Stockhaus in https://github.com/scverse/spatialdata-notebooks/issues/53#issuecomment-1735161353

LucaMarconato commented 7 months ago

Fixed.