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scverse / spatialdata

An open and interoperable data framework for spatial omics data
https://spatialdata.scverse.org/
BSD 3-Clause "New" or "Revised" License
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Parallelize `aggregate()` #743

Open LucaMarconato opened 3 weeks ago

LucaMarconato commented 3 weeks ago

aggregate() is not exploiting dask partitions and parallelization; using it may improve performance. We could make some experiments/benchmarks.

berombau commented 2 weeks ago

See Harpy aggregate implementation as mentioned by @ArneDefauw in #677.