Closed tcollins2011 closed 2 days ago
hi @tcollins2011 which version of squidpy ot skimage do you have?
@giovp I was using squidpy version 1.2.3
ok thanks, and scikit-image?
scikit-image was using version: 0.21.0
This seems like an issue with cropping/xarray, will take a look.
hi @tcollins2011 is this stil an issue? will close due to inactivity but feel free to reopen
Description
Hi All,
I've encountered an issue with passing a scaling factor for feature calculations. More specifically, whenever a scale value is passed that is not equivalent to the default value of 1.0, the program returns an unexpected dimension error. I was also able to reproduce this when following the Analyze Visium fluorescence data tutorial exactly in both a standard python file as well as a jupyter notebook.
Minimal reproducible example
Traceback
Version
1.2.3