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scverse / squidpy_notebooks

Tutorials for Squidpy
https://squidpy.readthedocs.io/en/stable/
MIT License
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Replace scanpy.pl.spatial with squidpy.pl.spatial_scatter #94

Closed dineshpalli closed 2 years ago

dineshpalli commented 2 years ago

Replace scanpy.pl.spatial with sq.pl.spatial_scatter in tutorials and examples

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giovp commented 2 years ago

seems you are not running pre-commits since black fails.

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giovp commented on 2022-06-21T09:54:26Z ----------------------------------------------------------------

nice that you played around with shapes!


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giovp commented on 2022-06-21T09:54:28Z ----------------------------------------------------------------

Line #1.    history = model.fit(

I like that you try to rerun this tutorial, but youd' hjave to run it through and not kill it before. You might use less epochs if you want.


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giovp commented on 2022-06-21T09:54:29Z ----------------------------------------------------------------

you can clearly see the different that the model didn't really converge.


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