sdparekh / zUMIs

zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
GNU General Public License v3.0
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Problem with STAR version #397

Open joannaslotaczarny opened 1 month ago

joannaslotaczarny commented 1 month ago

Hi,

I am using zUMIs for the very first time. My problem is that I generated the indexes with the same version of STAR that I use for mapping. I only have one version installed. The pipeline gives me a warning that I used the previous version to index the genome and then the pipeline fails.

"WARNING: The STAR version used for mapping is 2.7.10a and the STAR index was created using the version 2.7.4a. This may lead to an error while mapping. If you encounter any errors at the mapping stage, please make sure to create the STAR index using STAR 2.7.10a."

Can you tell me that can be the problem?

Best regards,

Asia