sdsc-ordes / modos-api

Python API to manage multi-omics digital objects
https://sdsc-ordes.github.io/modos-api
Apache License 2.0
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[Feature request]: stream command #86

Closed cmdoret closed 3 months ago

cmdoret commented 3 months ago

Contact Details

No response

Description

We need the ability to stream CRAM/BCF on the command line from modos into other tools.

Importance Level

High

Affected Components

cli

Technical Requirements

new subcommand in cli

Acceptance criteria

modos can stream remote + local CRAM/BCF on cli