Plots to do:

[quantifish]

• [x] bubble plots of lf resids
• [ ] size comp overall fit (mean across all years for obs/exp)
• [ ] MCMC input code
• [ ] grab some MCMC plotting code from rock lobster
• [ ] Get the R natural mortality plot to read the .ctl file and plot the knots
• [ ] make read-write function in R for data and ctl files...
• [ ] Put test in the plot routines that depend on *.std file to see if it's been written
• [x] size-comp plots no longer work properly (since I changed the fitting code)
• [x] knots in M plot
• [x] residual plot for abundance indices

[quantifish]

From Jim: This should work with the gmacs_in.ctl and gmacs_in.dat files that get written each time model is run. e.g., something like: myctl <- read_admb("gmacs_in.ctl") should work