Added R.utils to imports

seandavi / GEOquery

The bridge between the NCBI Gene Expression Omnibus and Bioconductor

http://seandavi.github.io/GEOquery/

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Added R.utils to imports #121

Closed khughitt closed 3 years ago

khughitt commented 3 years ago

Needed by data.table::fread to handle compresed files, or else, calls to getGEO() will result in:

Error in data.table::fread(fname, sep = "") :
  To read gz and bz2 files directly, fread() requires 'R.utils' package which cannot
 be found. Please install 'R.utils' using 'install.packages('R.utils')'.
Calls: getGEO -> getAndParseGSEMatrices -> parseGSEMatrix -> <Anonymous>

seandavi commented 3 years ago

Thx!